Primer3 Output
No mispriming library specified
Using 1-based sequence positions
OLIGO start len tm gc% any 3' seq
LEFT PRIMER 89 20 60.95 55.00 5.00 2.00 TCTGTCACACCGACTTGCAC
RIGHT PRIMER 310 20 59.05 55.00 4.00 2.00 AGTCAGCGTGAGGACAGTTG
SEQUENCE SIZE: 325
INCLUDED REGION SIZE: 325
PRODUCT SIZE: 222, PAIR ANY COMPL: 7.00, PAIR 3' COMPL: 3.00
TARGETS (start, len)*: 118,171
1 GAATCCCACGGTAAATTGGAACACAAGGATATTCCAGTTCCAAAGCCAAAGGCCAACGAA
61 TTGTTGATCAACGTTAAGTACTCTGGTGTCTGTCACACCGACTTGCACGCTTGGCACGGT
>>>>>>>>>>>>>>>>>>>> ***
121 GACTGGCCATTGCCAGTTAAGCTACCATTAGTCGGTGGTCACGAAGGTGCCGGTGTCGTT
************************************************************
181 GTCGGCATGGGTGAAAACGTTAAGGGCTGGAAGATCGGTGACTACGCCGGTATCAAATGG
************************************************************
241 TTGAACGGTTCTTGTATGGCCTGTGAATACTGTGAATTGGGTAACGAATCCAACTGTCCT
************************************************ <<<<<<<<<<
301 CACGCTGACTTGTCTGGTTACACCC
<<<<<<<<<<
KEYS (in order of precedence):
****** target
>>>>>> left primer
<<<<<< right primer
ADDITIONAL OLIGOS
start len tm gc% any 3' seq
1 LEFT PRIMER 87 20 60.95 55.00 5.00 2.00 TGTCTGTCACACCGACTTGC
RIGHT PRIMER 310 20 59.05 55.00 4.00 2.00 AGTCAGCGTGAGGACAGTTG
PRODUCT SIZE: 224, PAIR ANY COMPL: 8.00, PAIR 3' COMPL: 3.00
2 LEFT PRIMER 84 20 60.21 55.00 5.00 3.00 TGGTGTCTGTCACACCGACT
RIGHT PRIMER 307 19 61.04 57.89 3.00 0.00 CAGCGTGAGGACAGTTGGA
PRODUCT SIZE: 224, PAIR ANY COMPL: 5.00, PAIR 3' COMPL: 3.00
3 LEFT PRIMER 89 20 60.95 55.00 5.00 2.00 TCTGTCACACCGACTTGCAC
RIGHT PRIMER 311 21 60.49 52.38 4.00 2.00 AAGTCAGCGTGAGGACAGTTG
PRODUCT SIZE: 223, PAIR ANY COMPL: 8.00, PAIR 3' COMPL: 3.00
4 LEFT PRIMER 89 20 60.95 55.00 5.00 2.00 TCTGTCACACCGACTTGCAC
RIGHT PRIMER 309 20 61.90 60.00 4.00 0.00 GTCAGCGTGAGGACAGTTGG
PRODUCT SIZE: 221, PAIR ANY COMPL: 6.00, PAIR 3' COMPL: 3.00
Statistics
con too in in no tm tm high high high
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Left 836 0 0 0 0 0 278 300 0 9 0 14 235
Right 143 0 0 0 0 0 32 67 0 3 0 3 38
Pair Stats:
considered 1010, unacceptable product size 891, high any compl 66, high end compl 36, ok 17
primer3 release 1.0
(primer3_www_results.cgi v 0.4)